STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PRPE_ECOLI
P77495
prpE
b0335 JW0326
cytoplasmic peripheral IM protein, Propionate--CoA ligase PrpE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
SUFC_ECOLI
P77499
sufC
b1682 JW1672
cytoplasmic peripheral IM protein, Probable ATP-dependent transporter SufC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
YPHE_ECOLI
P77509
yphE
b2547 JW2531
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YphE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
SUFB_ECOLI
P77522
sufB
b1683 JW5273
cytoplasmic peripheral IM protein, FeS cluster assembly SufB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RSXC_ECOLI
P77611
rsxC
b1629 JW1621
cytoplasmic peripheral IM protein, Ion-translocating oxidoreductase complex subunit C RsxC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
yes
yes
DDPF_ECOLI
P77622
ddpF
b1483 JW1478
cytoplasmic peripheral IM protein, Probable D,D-dipeptide transport ATP-binding DdpF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
yes
yes
ARCM_ECOLI
P77624
yahI
b0323 JW0315
cytoplasmic peripheral IM protein, Carbamate kinase-like YahI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
SUFA_ECOLI
P77667
sufA
b1684 JW1674
cytoplasmic peripheral IM protein, SufA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
no
SUFD_ECOLI
P77689
sufD
b1681 JW1671
cytoplasmic peripheral IM protein, FeS cluster assembly SufD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
OPPF_ECOLI
P77737
oppF
b1247 JW1239
cytoplasmic peripheral IM protein, Oligopeptide transport ATP-binding OppF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
YDIJ_ECOLI
P77748
ydiJ
b1687 JW1677
cytoplasmic peripheral IM protein, YdiJ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
YDCT_ECOLI
P77795
ydcT
b1441 JW1436
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YdcT
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YGHU_ECOLI
Q46845
yghU
b2989 JW5492
cytoplasmic peripheral IM protein, Disulfide-bond oxidoreductase YghU
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Membrane anchored
 
 
 
 
 
yes
yes
YQHD_ECOLI
Q46856
yqhD
b3011 JW2978
cytoplasmic peripheral IM protein, Alcohol dehydrogenase YqhD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
CSDA_ECOLI
Q46925
csdA
b2810 JW2781
cytoplasmic peripheral IM protein, Cysteine desulfurase CsdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
FDRA_ECOLI
Q47208
fdrA
b0518 JW0506
cytoplasmic peripheral IM protein, FdrA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell membrane
Integral Membrane Protein
 
 
 
 
 
yes
yes
TAUB_ECOLI
Q47538
tauB
b0366 JW0358
cytoplasmic peripheral IM protein, Taurine import ATP-binding TauB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
yes
yes
YTFR_ECOLI
Q6BEX0
ytfR
b4485 JW5752
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YtfR
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
ADPP_ECOLI
Q93K97
nudF
b3034 JW3002
cytoplasmic peripheral IM protein, ADP-ribose pyrophosphatase NudF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction +
 
Cytoplasmic
 
 
 
 
 
yes
yes
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