STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YPHE_ECOLI
P77509
yphE
b2547 JW2531
Uncharacterized ABC transporter ATP-binding protein yphE
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
SUFB_ECOLI
P77522
sufB
b1683 JW5273
FeS cluster assembly protein sufB
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RNFC_ECOLI
P77611
rnfC
b1629 JW1621
Electron transport complex protein rnfC
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
DDPF_ECOLI
P77622
ddpF
b1483 JW1478
Probable D,D-dipeptide transport ATP-binding protein ddpF
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
ARCM_ECOLI
P77624
yahI
b0323 JW0315
Carbamate kinase-like protein yahI
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
SUFD_ECOLI
P77689
sufD
b1681 JW1671
FeS cluster assembly protein sufD
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
OPPF_ECOLI
P77737
oppF
b1247 JW1239
Oligopeptide transport ATP-binding protein oppF
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
YDIJ_ECOLI
P77748
ydiJ
b1687 JW1677
Uncharacterized protein ydiJ
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
YDCT_ECOLI
P77795
ydcT
b1441 JW1436
Uncharacterized ABC transporter ATP-binding protein ydcT
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YGHU_ECOLI
Q46845
yghU
b2989 JW5492
Uncharacterized GST-like protein yghU
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Membrane anchored
 
 
 
 
 
yes
yes
YQHD_ECOLI
Q46856
yqhD
b3011 JW2978
Alcohol dehydrogenase yqhD (EC 1.1.1.-)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
CSDA_ECOLI
Q46925
csdA
b2810 JW2781
Cysteine sulfinate desulfinase (CSD) (EC 4.4.1.-)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
FDRA_ECOLI
Q47208
fdrA
b0518 JW0506
Protein fdrA
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
 
 
 
 
yes
yes
TAUB_ECOLI
Q47538
tauB
b0366 JW0358
Taurine import ATP-binding protein TauB (EC 3.6.3.36)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
YTFR_ECOLI
Q6BEX0
ytfR
b4485 JW5752
Uncharacterized ABC transporter ATP-binding protein ytfR
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
ADPP_ECOLI
Q93K97
nudF
b3034 JW3002
ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (ADP-ribose phosphohydrolase) (ASPPase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction +
 
Cytoplasmic
 
 
 
 
 
yes
yes
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