STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DHSB_ECOLI
P07014
sdhB
b0724 JW0714
Succinate dehydrogenase iron-sulfur subunit (EC 1.3.99.1)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
Cell inner membrane | Peripheral membrane protein
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
HISP_ECOLI
P07109
hisP
b2306 JW2303
Histidine transport ATP-binding protein hisP
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
CHEA_ECOLI
P07363
cheA
b1888 JW1877
Chemotaxis protein CheA (EC 2.7.13.3)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted), Soluble IM Fraction +
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
SYFB_ECOLI
P07395
pheT
b1713 JW1703
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
TYPH_ECOLI
P07650
deoA
b4382 JW4345
Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
no
yes
FHUC_ECOLI
P07821
fhuC
b0151 JW0147
Iron(3+)-hydroxamate import ATP-binding protein fhuC (EC 3.6.3.34) (Ferric hydroxamate uptake protein C) (Ferrichrome transport ATP-binding protein fhuC) (Iron(III)-hydroxamate import ATP-binding protein fhuC)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
IDH_ECOLI
P08200
icd
b1136 JW1122
Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
TF
 
 
 
yes
yes
SYFA_ECOLI
P08312
pheS
b1714 JW5277
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DNAJ_ECOLI
P08622
dnaJ
b0015 JW0014
Chaperone protein dnaJ (HSP40) (Heat shock protein J)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PT1_ECOLI
P08839
ptsI
b2416 JW2409
Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
NARG_ECOLI
P09152
narG
b1224 JW1215
Respiratory nitrate reductase 1 alpha chain (EC 1.7.99.4) (Nitrate reductase A subunit alpha) (Quinol-nitrate oxidoreductase subunit alpha)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
GRPE_ECOLI
P09372
grpE
b2614 JW2594
Protein grpE (HSP-70 cofactor) (HSP24) (Heat shock protein B25.3)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
PFLB_ECOLI
P09373
pflB
b0903 JW0886
Formate acetyltransferase 1 (EC 2.3.1.54) (Pyruvate formate-lyase 1)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
PUTA_ECOLI
P09546
putA
b1014 JW0999
Bifunctional protein putA [Includes: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) (EC 1.5.1.12)]
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
GLTB_ECOLI
P09831
gltB
b3212 JW3179
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) (Glutamate synthase subunit alpha) (GLTS alpha chain) (NADPH-GOGAT)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
MODC_ECOLI
P09833
modC
b0765 JW0748
Uncharacterized protein ybbV
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
no
yes
UVRA_ECOLI
P0A698
uvrA
b4058 JW4019
UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
ACKA_ECOLI
P0A6A3
ackA
b2296 JW2293
Acetate kinase (EC 2.7.2.1) (Acetokinase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ACP_ECOLI
P0A6A8
acpP
b1094 JW1080
Acyl carrier protein (ACP) (Cytosolic-activating factor) (CAF) (Fatty acid synthase acyl carrier protein)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
no
yes
ISCS_ECOLI
P0A6B7
iscS
b2530 JW2514
Cysteine desulfurase (EC 2.8.1.7) (NifS protein homolog) (ThiI transpersulfidase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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