STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ARGB_ECOLI
P0A6C8
argB
b3959 JW5553
Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ASSY_ECOLI
P0A6E4
argG
b3172 JW3140
Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ATPE_ECOLI
P0A6E6
atpC
b3731 JW3709
ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic (Experimental)
 
 
 
 
 
no
yes
CARA_ECOLI
P0A6F1
carA
b0032 JW0030
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
GLPK_ECOLI
P0A6F3
glpK
b3926 JW3897
Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
CH60_ECOLI
P0A6F5
groL
b4143 JW4103
60 kDa chaperonin (Protein Cpn60) (groEL protein)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
CH10_ECOLI
P0A6F9
groS
b4142 JW4102
10 kDa chaperonin (Protein Cpn10) (groES protein)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
HSLU_ECOLI
P0A6H5
hslU
b3931 JW3902
ATP-dependent protease ATPase subunit HslU (Heat shock protein HslU) (Unfoldase HslU)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DADA_ECOLI
P0A6J5
dadA
b1189 JW1178
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
TF
YidC
 
 
yes
yes
DEF_ECOLI
P0A6K3
def
b3287 JW3248
Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
DEOB_ECOLI
P0A6K6
deoB
b4383 JW4346
Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DEOC_ECOLI
P0A6L0
deoC
b4381 JW4344
Deoxyribose-phosphate aldolase (EC 4.1.2.4) (Phosphodeoxyriboaldolase) (DERA) (Deoxyriboaldolase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
EFG_ECOLI
P0A6M8
fusA
b3340 JW3302
Elongation factor G (EF-G)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
EFTS_ECOLI
P0A6P1
tsf
b0170 JW0165
Elongation factor Ts (EF-Ts)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
DER_ECOLI
P0A6P5
der
b2511 JW5403
GTP-binding protein engA (Double era-like domain protein)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ENGB_ECOLI
P0A6P7
engB
b3865 JW5930
Probable GTP-binding protein engB
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ENO_ECOLI
P0A6P9
eno
b2779 JW2750
Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, Peripheral outer membrane protein facing the extra-cellular space
A, F1, F4
Soluble IM Fraction
Cytoplasm -> cytoskeleton | Secreted | Cell surface
Cytoplasmic (Experimental)
 
 
Uknown mechanism
 
 
yes
yes
FABZ_ECOLI
P0A6Q6
fabZ
b0180 JW0175
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase) (EC 4.2.1.-) (17 kDa actomyosin component)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
FIS_ECOLI
P0A6R3
fis
b3261 JW3229
DNA-binding protein fis (Factor-for-inversion stimulation protein) (Hin recombinational enhancer-binding protein)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
MNMG_ECOLI
P0A6U3
mnmG
b3741 JW3719
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (Glucose-inhibited division protein A)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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