STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DEOB_ECOLI
P0A6K6
deoB
b4383 JW4346
cytoplasmic peripheral IM protein, Phosphopentomutase DeoB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DEOC_ECOLI
P0A6L0
deoC
b4381 JW4344
cytoplasmic peripheral IM protein, Deoxyribose-phosphate aldolase DeoC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
EFG_ECOLI
P0A6M8
fusA
b3340 JW3302
cytoplasmic peripheral IM protein, Elongation factor G FusA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
EFTS_ECOLI
P0A6P1
tsf
b0170 JW0165
cytoplasmic peripheral IM protein, Elongation factor Ts Tsf
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
DER_ECOLI
P0A6P5
der
b2511 JW5403
ribosomal cytoplasmic peripheral IM protein, GTPase Der
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ENGB_ECOLI
P0A6P7
engB
b3865 JW5930
cytoplasmic peripheral IM protein, Probable GTP-binding EngB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ENO_ECOLI
P0A6P9
eno
b2779 JW2750
cytoplasmic peripheral IM protein facing the cytoplasm & peripheral OM protein facing the extra-cellular space (SEC through IM), Enolase Eno
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, Peripheral outer membrane protein facing the extra-cellular space
A, F1, F4
Soluble IM Fraction
Cytoplasm; cytoskeleton Secreted Cell surface
Cytoplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FABZ_ECOLI
P0A6Q6
fabZ
b0180 JW0175
cytoplasmic peripheral IM protein, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
FIS_ECOLI
P0A6R3
fis
b3261 JW3229
cytoplasmic nucleoid peripheral IM protein, DNA-binding Fis
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm; nucleoid
Cytoplasmic
 
 
 
 
 
yes
yes
MNMG_ECOLI
P0A6U3
mnmG
b3741 JW3719
cytoplasmic peripheral IM protein, tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
GLGA_ECOLI
P0A6U8
glgA
b3429 JW3392
cytoplasmic peripheral IM protein, Glycogen synthase GlgA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HEM1_ECOLI
P0A6X1
hemA
b1210 JW1201
cytoplasmic peripheral IM protein, Glutamyl-tRNA reductase HemA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HFQ_ECOLI
P0A6X3
hfq
b4172 JW4130
cytoplasmic nucleoid peripheral IM protein, RNA-binding Hfq
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
IHFA_ECOLI
P0A6X7
ihfA
b1712 JW1702
cytoplasmic nucleoid peripheral IM protein, Integration host factor subunit alpha IhfA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm; nucleoid
Cytoplasmic
 
 
 
 
 
no
yes
IHFB_ECOLI
P0A6Y1
ihfB
b0912 JW0895
cytoplasmic nucleoid peripheral IM protein, Integration host factor subunit beta IhfB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
HSLO_ECOLI
P0A6Y5
hslO
b3401 JW5692
cytoplasmic peripheral IM protein, 33 kDa chaperonin HslO
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DNAK_ECOLI
P0A6Y8
dnaK
b0014 JW0013
cytoplasmic peripheral IM protein of Hsp70 family, Chaperone DnaK
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
HTPG_ECOLI
P0A6Z3
htpG
b0473 JW0462
cytoplasmic peripheral IM protein, Chaperone HtpG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
IF2_ECOLI
P0A705
infB
b3168 JW3137
ribosomal cytoplasmic peripheral IM protein, Translation initiation factor IF-2 InfB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
IF3_ECOLI
P0A707
infC
b1718 JW5829
ribosomal cytoplasmic peripheral IM protein, Translation initiation factor IF-3 InfC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
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