STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Non-classical secretome   Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Non-classical secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
LOMR_ECOLI
P77184
lomR
b4570 JW5884/JW5904 b1369/b1371
OM b-barrel protein (SEC through IM), Putative LomR
Outer Membrane b-barrel protein
H
N/A
 
Cytoplasmic
 
 
SEC
 
 
no
no
YCGI_ECOLI
P76000
ycgI

ymgH

b4521 JW1162/JW5179 b1173
OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative YcgI
Outer Membrane b-barrel protein
H
N/A
 
Cytoplasmic
 
 
SEC
 
Autotransporter(T5S)
no
no
YCGV_ECOLI
P76017
ycgV
b1202 JW1193
OM b-barrel protein (SEC through IM, T5S secreted through OM), YcgV
Outer Membrane b-barrel protein
H
IM (predicted)
 
Cytoplasmic
 
SRP
SEC
 
Autotransporter(T5S)
no
yes
YDEU_ECOLI
P77286
ydeU
b1509 JW1502
OM b-barrel protein (SEC through IM, T5S secreted through OM), YdeU
Outer Membrane b-barrel protein
H
N/A
 
Cytoplasmic
 
 
SEC
 
Autotransporter(T5S)
no
yes
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 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.