STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
LIVJ_ECOLI
P0AD96
livJ
b3460 JW3425
periplasmic protein (SEC through IM), Leu/Ile/Val-binding LivJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
TESA_ECOLI
P0ADA1
tesA

apeA pldC

b0494 JW0483
periplasmic protein (SEC through IM), Thioesterase 1/protease 1/lysophospholipase L1 TesA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
YHCF_ECOLI
P45422
yhcF
b3219 JW3188
Fimbrial periplasmic protein (SEC through IM), YhcF
Periplasmic
G
N/A
 
Periplasmic
fimbriae
 
SEC
 
 
no
yes
YAJI_ECOLI
P46122
yajI
b0412 JW5056
OM lipoprotein (SEC through IM, inserted in OM by LOL), YajI
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YFIM_ECOLI
P46126
yfiM
b2586 JW2570
IM lipoprotein (SEC through IM, inserted in OM by LOL), YfiM
Inner Membrane Lipoprotein
E
N/A
 
Cytoplasmic
 
 
SEC
 
LOL
yes
yes
NLPD_ECOLI
P0ADA3
nlpD
b2742 JW2712
OM lipoprotein (SEC through IM), inserted in OM by LOL), Murein hydrolase activator NlpD
Outer Membrane Lipoprotein
I
N/A
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YAJG_ECOLI
P0ADA5
yajG
b0434 JW0424
OM lipoprotein (SEC through IM, inserted in OM by LOL), YajG
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
OSME_ECOLI
P0ADB1
osmE

anr

b1739 JW1728
OM lipoprotein (SEC through IM), inserted in OM by LOL), Osmotically-inducible putative OsmE
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
ECNB_ECOLI
P0ADB7
ecnB

yjeU

b4411 JW4108
OM lipoprotein (SEC through IM), inserted in OM by LOL), Entericidin B EcnB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
LPTE_ECOLI
P0ADC1
lptE

rlpB

b0641 JW0636
OM lipoprotein (SEC through IM), inserted in OM by LOL), LPS-assembly LptE
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YGGM_ECOLI
P46142
yggM
b2956 JW2923
periplasmic protein (SEC through IM), YggM
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YFJT_ECOLI
P52135
yfjT
b2637 JW2618
periplasmic protein (SEC through IM), YfjT
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
no
TAMA_ECOLI
P0ADE4
tamA

yftM ytfM

b4220 JW4179
OM b-barrel protein (SEC through IM, inserted in OM by BAM and TAM), Translocation and assembly module subunit TamA
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein
 
 
SEC
 
BAM
yes
yes
YIAF_ECOLI
P0ADK0
yiaF
b3554 JW5655
IM lipoprotein (SEC through IM, inserted in OM by LOL), YiaF
Inner Membrane Lipoprotein
E
Soluble IM Fraction
 
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
YIFL_ECOLI
P0ADN6
yifL
b4558 JW3781
OM lipoprotein (SEC through IM, inserted in OM by LOL), YifL
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YGGN_ECOLI
P0ADS9
yggN
b2958 JW2925
periplasmic protein (SEC through IM), YggN
Periplasmic
G
N/A
 
Periplasmic(experimental)
 
 
SEC
DSBA
 
yes
yes
MLAC_ECOLI
P0ADV7
mlaC

yrbC

b3192 JW3159
periplasmic protein (SEC through IM), Interphospholipid transport system binding MlaC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
YNBE_ECOLI
P64448
ynbE
b1382 JW1377
OM lipoprotein (SEC through IM, inserted in OM by LOL), YnbE
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YNCJ_ECOLI
P64459
yncJ
b1436 JW1432
periplasmic protein (SEC through IM), YncJ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YOAF_ECOLI
P64493
yoaF
b1793 JW1782
OM lipoprotein (SEC through IM, inserted in OM by LOL), YoaF
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
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