STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
NRFA_ECOLI
P0ABK9
nrfA
b4070 JW4031
Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
NRFB_ECOLI
P0ABL1
nrfB

yjcI

b4071 JW4032
Cytochrome c-type protein nrfB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
NAPB_ECOLI
P0ABL3
napB

yejY

b2203 JW5367
Diheme cytochrome c napB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
SFMA_ECOLI
P0ABW5
sfmA
b0530 JW0519
Sfm fimbrial protein, A chain (Type-1A pilin)
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
yes
yes
SURA_ECOLI
P0ABZ6
surA
b0053 JW0052
Chaperone surA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (EC 5.2.1.8) (Rotamase surA) (Survival protein A)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
YIAT_ECOLI
P37681
yiaT
b3584 JW3556
Putative outer membrane protein yiaT
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane | Peripheral membrane protein
Outer Membrane β-barrel protein
 
 
SEC
 
 
no
yes
YTFJ_ECOLI
P39187
ytfJ
b4216 JW4175
Uncharacterized protein ytfJ
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
 
 
yes
yes
YQJC_ECOLI
P42616
yqjC
b3097 JW5516
Protein yqjC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
BAMD_ECOLI
P0AC02
bamD

yfiO

b2595 JW2577
UPF0169 lipoprotein yfiO
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein(experimental)
 
 
SEC
 
LOL
yes
yes
YEEZ_ECOLI
P0AD12
yeeZ
b2016 JW1998
Protein yeeZ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
SURA
 
yes
yes
IVY_ECOLI
P0AD59
ivy

ykfE

b0220 JW0210
Inhibitor of vertebrate lysozyme
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
LIVJ_ECOLI
P0AD96
livJ
b3460 JW3425
Leu/Ile/Val-binding protein (LIV-BP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
YHCE_ECOLI
P45421
yhcE
b4569 b3217
Putative uncharacterized protein yhcE
Periplasmic
G
N/A
Cell outer membrane | Multi-pass membrane protein
Periplasmic
fimbriae
 
SEC
 
 
no
no
YHCF_ECOLI
P45422
yhcF
b3219 JW3188
Uncharacterized protein yehD
Periplasmic
G
N/A
 
Periplasmic
fimbriae
 
SEC
 
 
no
yes
HOFP_ECOLI
P45750
hofP

yrfA

b3392 JW5694
Uncharacterized protein yrfA
Periplasmic
G
IM (predicted-detected)
 
Cytoplasmic
 
 
SEC
 
 
no
yes
TESA_ECOLI
P0ADA1
tesA

apeA pldC

b0494 JW0483
Acyl-CoA thioesterase I (EC 3.1.2.-) (Lecithinase B) (Lysophospholipase L1) (EC 3.1.1.5) (Protease I)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
NLPD_ECOLI
P0ADA3
nlpD
b2742 JW2712
Lipoprotein nlpD
Outer Membrane Lipoprotein
I
N/A
Cell inner membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YAJG_ECOLI
P0ADA5
yajG
b0434 JW0424
Uncharacterized lipoprotein yajG
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
OSME_ECOLI
P0ADB1
osmE

anr

b1739 JW1728
Osmotically-inducible lipoprotein E (Activator of ntr-like gene protein)
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
ECNB_ECOLI
P0ADB7
ecnB

yjeU

b4411 JW4108
Entericidin B
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
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