STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YAJI_ECOLI
P46122
yajI
b0412 JW5056
Uncharacterized lipoprotein yajI
Outer Membrane Lipoprotein
I
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YFIM_ECOLI
P46126
yfiM
b2586 JW2570
Uncharacterized protein yfiM
Inner Membrane Lipoprotein
E
N/A
 
Cytoplasmic
 
 
SEC
 
LOL
yes
yes
YGGM_ECOLI
P46142
yggM
b2956 JW2923
Uncharacterized protein yggM
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
LPTE_ECOLI
P0ADC1
lptE

rlpB

b0641 JW0636
LPS-assembly lipoprotein lptE (Rare lipoprotein B)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
TAMA_ECOLI
P0ADE4
tamA

yftM ytfM

b4220 JW4179
Translocation and assembly module TamA
Outer Membrane b-barrel protein
H
N/A
 
Outer Membrane β-barrel protein
 
 
SEC
 
BAM
yes
yes
YIAF_ECOLI
P0ADK0
yiaF
b3554 JW5655
Uncharacterized protein yiaF
Inner Membrane Lipoprotein
E
Soluble IM Fraction
 
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
YGGN_ECOLI
P0ADS9
yggN
b2958 JW2925
Uncharacterized protein yggN
Periplasmic
G
N/A
 
Periplasmic(experimental)
 
 
SEC
DSBA
 
yes
yes
ACRA_ECOLI
P0AE06
acrA

lir mtcA

b0463 JW0452
Acriflavine resistance protein A
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
CSGC_ECOLI
P52107
csgC
b1043 JW1026
Curli assembly protein CsgC
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
no
yes
YFJT_ECOLI
P52135
yfjT
b2637 JW2618
Uncharacterized protein yfjT
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
no
HSLJ_ECOLI
P52644
hslJ

ydbI

b1379 JW1374
Heat shock protein hslJ
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
APHA_ECOLI
P0AE22
aphA

napA yjbP

b4055 JW4015
Class B acid phosphatase (EC 3.1.3.2)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
CPXP_ECOLI
P0AE85
cpxP

yiiO

b4484 JW5558
Periplasmic protein CpxP
Peripheral inner membrane protein facing the periplasm
F2
N/A
Periplasm
Membrane associated (Experimental)
 
 
SEC
 
 
yes
yes
CSGE_ECOLI
P0AE95
csgE
b1039 JW1022
Curli production assembly/transport component csgE
Periplasmic
G
N/A
 
Periplasmic (Experimental)
Curli
 
SEC
SURA
 
yes
yes
CSGF_ECOLI
P0AE98
csgF
b1038 JW1021
Curli production assembly/transport component csgF
Peripheral outer membrane protein facing the extra-cellular space
F4
N/A
 
Periplasmic (Experimental)
Curli
 
SEC
 
Curli
yes
yes
CSGG_ECOLI
P0AEA2
csgG
b1037 JW1020
Curli production assembly/transport component csgG
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
Curli
 
SEC
 
LOL
yes
yes
RZOD_ECOLI
P58041
rzoD
b4510 JW5080
Outer membrane lipoprotein Rz1 from lambdoid prophage DLP12
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
no
RZOR_ECOLI
P58042
rzoR
b4528 JW5213
Outer membrane lipoprotein Rz1 from lambdoid prophage Rac
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
no
DACA_ECOLI
P0AEB2
dacA

pfv

b0632 JW0627
D-alanyl-D-alanine carboxypeptidase dacA (DD-carboxypeptidase) (DD-peptidase) (EC 3.4.16.4) (Beta-lactamase) (EC 3.5.2.6) (Penicillin-binding protein 5) (PBP-5)
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein | Cytoplasmic side
Membrane anchored (Experimental)
 
 
SEC
 
 
yes
yes
DCRB_ECOLI
P0AEE1
dcrB

yhhR

b3472 JW5682
Protein dcrB
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Periplasm
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
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