STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DEGS_ECOLI
P0AEE3
degS

hhoB htrH

b3235 JW3204
Protease degS (EC 3.4.21.-)
Periplasmic
G
Soluble IM Fraction
Periplasm
Membrane anchored
 
 
SEC
 
 
yes
yes
YNBE_ECOLI
P64448
ynbE
b1382 JW1377
Uncharacterized protein ynbE
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YNCJ_ECOLI
P64459
yncJ
b1436 JW1432
Uncharacterized protein yncJ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YOAF_ECOLI
P64493
yoaF
b1793 JW1782
Uncharacterized protein yoaF
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YEBY_ECOLI
P64506
yebY
b1839 JW1828
Uncharacterized protein yebY
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
DSBA
 
yes
yes
DGAL_ECOLI
P0AEE5
mglB
b2150 JW2137
Autoinducer 2 import ATP-binding protein lsrA (AI-2 import ATP-binding protein lsrA) (EC 3.6.3.-) (EGO10A)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SKP
 
no
yes
DSBA_ECOLI
P0AEG4
dsbA

dsf ppfA

b3860 JW3832
Thiol:disulfide interchange protein DsbA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SRP (exp)
SEC
 
 
yes
yes
DSBC_ECOLI
P0AEG6
dsbC

xprA

b2893 JW2861
Thiol:disulfide interchange protein DsbC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FEPB_ECOLI
P0AEL6
fepB
b0592 JW0584
Ferrienterobactin-binding periplasmic protein
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FLIY_ECOLI
P0AEM9
fliY

yzzR

b1920 JW1905
Cystine-binding periplasmic protein (CBP) (Protein fliY) (Sulfate starvation-induced protein 7) (SSI7)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
YOHN_ECOLI
P64534
rcnB

yohN

b2107 JW5346
Uncharacterized protein yehE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YPEC_ECOLI
P64542
ypeC
b2390 JW2387
Uncharacterized protein ypeC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YFIR_ECOLI
P64548
yfiR
b2603 JW2584
Uncharacterized protein yfiR
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
GLNH_ECOLI
P0AEQ3
glnH
b0811 JW0796
Glutamine-binding periplasmic protein (GlnBP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
HDEA_ECOLI
P0AES9
hdeA

yhhC yhiB

b3510 JW3478
Chaperone-like protein hdeA (10K-S protein)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
HDEB_ECOLI
P0AET2
hdeB

yhhD yhiC

b3509 JW5669
Protein hdeB (10K-L protein)
Periplasmic
G
N/A
 
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
HISJ_ECOLI
P0AEU0
hisJ
b2309 JW2306
Histidine-binding periplasmic protein (HBP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
YHCN_ECOLI
P64614
yhcN
b3238 JW5540
Uncharacterized protein yhcN
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
yes
yes
YHDV_ECOLI
P64622
yhdV
b3267 JW3235
Uncharacterized protein yhdV
Outer Membrane Lipoprotein
I
IM (predicted)
Cell membrane | Multi-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YHFL_ECOLI
P64627
yhfL
b3369 JW3332
Uncharacterized protein yhfL
Outer Membrane Lipoprotein
I
N/A
Membrane | Single-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
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