STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RCLB_ECOLI
P75687
rclB

ykgI

b0303 JW5039
periplasmic protein (SEC through IM), RclB
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
no
yes
YAHO_ECOLI
P75694
yahO
b0329 JW0321
periplasmic protein (SEC through IM), YahO
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
no
yes
FEPB_ECOLI
P0AEL6
fepB
b0592 JW0584
periplasmic protein (SEC through IM), Ferrienterobactin-binding periplasmic protein FepB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FLIY_ECOLI
P0AEM9
fliY

yzzR

b1920 JW1905
periplasmic protein (SEC through IM), L-cystine-binding FliY
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
GLNH_ECOLI
P0AEQ3
glnH
b0811 JW0796
periplasmic protein (SEC through IM), Glutamine-binding periplasmic GlnH
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
HDEA_ECOLI
P0AES9
hdeA

yhhC yhiB

b3510 JW3478
periplasmic protein (SEC through IM), Acid stress chaperone HdeA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
CHIQ_ECOLI
P75734
chiQ

ybfN

b0682 JW0668
OM lipoprotein (SEC through IM, inserted in OM by LOL), ChiQ
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
GFCC_ECOLI
P75883
gfcC

ymcB

b0985 JW0968
periplasmic protein (SEC through IM), GfcC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YMDA_ECOLI
P75917
ymdA
b1044 JW1031
periplasmic protein (SEC through IM), YmdA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YCFL_ECOLI
P75946
ycfL
b1104 JW1090
OM lipoprotein (SEC through IM, inserted in OM by LOL), YcfL
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
HDEB_ECOLI
P0AET2
hdeB

yhhD yhiC

b3509 JW5669
periplasmic protein (SEC through IM), Acid stress chaperone HdeB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
HISJ_ECOLI
P0AEU0
hisJ
b2309 JW2306
periplasmic protein (SEC through IM), Histidine-binding periplasmic HisJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
SKP_ECOLI
P0AEU7
skp

hlpA ompH

b0178 JW0173
periplasmic protein (SEC through IM), Chaperone Skp
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
 
 
yes
yes
MALE_ECOLI
P0AEX9
malE
b4034 JW3994
periplasmic & peripheral IM protein (SEC through IM), Maltose/maltodextrin-binding periplasmic MalE
Peripheral inner membrane protein facing the periplasm, periplasmic
F2, G
N/A
Periplasm
Periplasmic (Experimental)
 
SecB
SEC
SURA,SKP,YfgM
 
yes
yes
YCGJ_ECOLI
P76001
ycgJ
b1177 JW1166
periplasmic protein (SEC through IM), YcgJ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YDBL_ECOLI
P76076
ydbL
b1383 JW5216
periplasmic protein (SEC through IM), YdbL
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
MLTD_ECOLI
P0AEZ7
mltD

dniR yafG

b0211 JW5018
OM lipoprotein (SEC through IM), inserted in OM by LOL), Membrane-bound lytic murein transglycosylase D MltD
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YJCO_ECOLI
P0AF56
yjcO
b4078 JW4039
periplasmic protein (SEC through IM), Sel1-repeat-containing YjcO
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YJEI_ECOLI
P0AF70
yjeI
b4144 JW5736
OM lipoprotein (SEC through IM, inserted in OM by LOL), YjeI
Outer Membrane Lipoprotein
I
Soluble IM Fraction
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
NLPI_ECOLI
P0AFB1
nlpI

yhbM

b3163 JW3132
OM lipoprotein (SEC through IM, inserted in OM by LOL), NlpI
Outer Membrane Lipoprotein
I
N/A
Cell membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
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