STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YFGH_ECOLI
P65290
yfgH
b2505 JW5400
Uncharacterized lipoprotein yfgH
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
SKP_ECOLI
P0AEU7
skp

hlpA ompH

b0178 JW0173
Chaperone protein skp (DNA-binding 17 kDa protein) (Histone-like protein HLP-1) (Seventeen kilodalton protein)
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
 
 
yes
yes
MALE_ECOLI
P0AEX9
malE
b4034 JW3994
Maltose-binding periplasmic protein (MMBP) (Maltodextrin-binding protein)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SecB
SEC
SURA,SKP,YfgM
 
yes
yes
MLTD_ECOLI
P0AEZ7
mltD

dniR yafG

b0211 JW5018
Membrane-bound lytic murein transglycosylase D (EC 4.2.2.n1) (Murein hydrolase D) (Regulatory protein dniR)
Outer Membrane Lipoprotein
I
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YJEI_ECOLI
P0AF70
yjeI
b4144 JW5736
Uncharacterized protein yjeI
Outer Membrane Lipoprotein
I
Soluble IM Fraction
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YGDR_ECOLI
P65294
ygdR
b2833 JW2801
Uncharacterized lipoprotein ygdR
Outer Membrane Lipoprotein
I
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YQHH_ECOLI
P65298
yqhH
b3014 JW2982
Uncharacterized lipoprotein yqhH
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
NLPI_ECOLI
P0AFB1
nlpI

yhbM

b3163 JW3132
Lipoprotein nlpI
Outer Membrane Lipoprotein
I
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
OSMY_ECOLI
P0AFH8
osmY
b4376 JW4338
Osmotically-inducible protein Y
Periplasmic, Extra-cellular
G, X
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
PBP7_ECOLI
P0AFI5
pbpG

yohB

b2134 JW5355
D-alanyl-D-alanine endopeptidase (DD-endopeptidase) (EC 3.4.21.-) (Penicillin-binding protein 7) (PBP-7)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
POTD_ECOLI
P0AFK9
potD
b1123 JW1109
Spermidine/putrescine-binding periplasmic protein (SPBP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
PTFB1_ECOLI
P69808
fryB

ypdH

b2387 JW5389
Fructose-like phosphotransferase enzyme IIB component 1 (EC 2.7.1.69) (PTS system fructose-like EIIB component 1)
Periplasmic
G
N/A
Cytoplasm
Periplasmic
 
 
SEC
 
 
yes
yes
NANC_ECOLI
P69856
nanC

yjhA

b4311 JW5778
Probable N-acetylneuraminic acid outer membrane channel protein nanC (NanR-regulated channel) (Porin nanC)
Periplasmic
G
N/A
Cell outer membrane
Periplasmic
 
 
SEC
 
 
no
yes
YAAX_ECOLI
P75616
yaaX
b0005 JW0004
Uncharacterized protein yaaX
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
PPIA_ECOLI
P0AFL3
ppiA

rot rotA

b3363 JW3326
Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Rotamase A)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
PROX_ECOLI
P0AFM2
proX

proU

b2679 JW2654
Glycine betaine-binding periplasmic protein
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA,DSBA
 
yes
yes
SPR_ECOLI
P0AFV4
spr

yeiV

b2175 JW2163
Lipoprotein spr
Outer Membrane Lipoprotein
I
N/A
Cell membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
RSEB_ECOLI
P0AFX9
rseB
b2571 JW2555
Sigma-E factor regulatory protein rseB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
SUBI_ECOLI
P0AG78
sbp
b3917 JW3888
Sulfate-binding protein (Sulfate starvation-induced protein 2) (SSI2)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
YKGI_ECOLI
P75687
ykgI
b0303 JW5039
Uncharacterized protein ykgI
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
no
yes
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