STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YAFL_ECOLI
Q47151
yafL
b0227 JW0217
periplasmic protein (SEC through IM), Probable endopeptidase YafL
Periplasmic
G
N/A
Cell membrane
Periplasmic
 
 
SEC
 
 
yes
yes
YAIO_ECOLI
Q47534
yaiO
b0358 JW0349
periplasmic protein (SEC through IM), YaiO
Periplasmic
G
N/A
Cell outer membrane
Periplasmic
 
 
SEC
 
 
no
yes
TAUA_ECOLI
Q47537
tauA

ssiA yaiR

b0365 JW0357
periplasmic protein (SEC through IM), Taurine-binding periplasmic TauA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
SAPA_ECOLI
Q47622
sapA
b1294 JW1287
periplasmic protein (SEC through IM), Probable ABC transporter periplasmic-binding SapA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
UIDC_ECOLI
Q47706
uidC

gusC

b1615 JW1607
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Membrane-associated UidC UidC
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein (Experimental)
 
 
SEC
 
BAM
no
yes
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