STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
FLGH_ECOLI
P0A6S0
flgH

fla FVIII flaY

b1079 JW5153
Flagellar L-ring protein (Basal body L-ring protein)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchorBacterial flagellum basal body
Outer membrane Lipoprotein (Experimental)
flagellum
 
SEC
 
LOL
yes
yes
YGIW_ECOLI
P0ADU5
ygiW
b3024 JW2992
Protein ygiW
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SECB
SEC
 
 
yes
yes
LPTA_ECOLI
P0ADV1
lptA

yhbN

b3200 JW3167
Lipopolysaccharide export system protein lptA
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
 
 
yes
yes
MLAC_ECOLI
P0ADV7
mlaC

yrbC

b3192 JW3159
Probable phospholipid-binding protein mlaC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
FLGI_ECOLI
P0A6S3
flgI

fla FIX flaM

b1080 JW1067
Flagellar P-ring protein (Basal body P-ring protein)
Periplasmic
G
N/A
PeriplasmBacterial flagellum basal body
Periplasmic (Experimental)
flagellum
SRP (exp)
SEC
DSBA
Fla
no
yes
TOLB_ECOLI
P0A855
tolB
b0740 JW5100
Protein tolB
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
SECB, SRP
SEC
 
 
no
yes
YCEI_ECOLI
P0A8X2
yceI
b1056 JW1043
Protein yceI
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
BLC_ECOLI
P0A901
blc

yjeL

b4149 JW4110
Outer membrane lipoprotein blc
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YHHA_ECOLI
P0ADX7
yhhA
b3448 JW3413
Uncharacterized protein yhhA (ORFQ)
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
CREA_ECOLI
P0AE91
creA

yjjD

b4397 JW4360
Protein creA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
DSBA
 
yes
yes
YJBE_ECOLI
P0AF45
yjbE
b4026 JW3986
Uncharacterized protein yjbE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YJCO_ECOLI
P0AF56
yjcO
b4078 JW4039
Uncharacterized protein yjcO
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
BAMC_ECOLI
P0A903
nlpB

dapX nlpB

b2477 JW2462
Lipoprotein 34
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
SLYB_ECOLI
P0A905
slyB
b1641 JW1633
Outer membrane lipoprotein slyB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
MIPA_ECOLI
P0A908
mipA

yeaF

b1782 JW1771
MltA-interacting protein
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
yes
YJFN_ECOLI
P0AF82
yjfN
b4188 JW5742
Uncharacterized protein yjfN
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
yes
yes
YJFY_ECOLI
P0AF86
yjfY
b4199 JW4157
Uncharacterized protein yjfY
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
yes
yes
PSIF_ECOLI
P0AFM4
psiF
b0384 JW5054
Phosphate starvation-inducible protein psiF
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
RUTC_ECOLI
P0AFQ5
rutC

ycdK

b1010 JW0995
UPF0076 protein rutC (Pyrimidine utilization protein C)
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
OMPA_ECOLI
P0A910
ompA

con tolG tut

b0957 JW0940
Outer membrane protein A (Outer membrane protein II*)
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
TF
SEC
SKP,SURA,DEGP,DSBA
BAM
yes
yes
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