STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
TSX_ECOLI
P0A927
tsx

nupA

b0411 JW0401
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Nucleoside-specific channel-forming Tsx
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane
Outer Membrane ??-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
no
WZA_ECOLI
P0A930
wza
b2062 JW2047
OM lipoprotein & extra-cellular peripheral OM protein (SEC through IM), inserted in OM by LOL), Putative polysaccharide export Wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
GFCE_ECOLI
P0A932
gfcE

yccZ

b0983 JW0966
OM lipoprotein (SEC through IM), inserted in OM by LOL), Putative polysaccharide export GfcE
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
MLTA_ECOLI
P0A935
mltA

mlt ygdM

b2813 JW2784
OM lipoprotein (SEC through IM), inserted in OM by LOL), Membrane-bound lytic murein transglycosylase A MltA
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YBFC_ECOLI
P28915
ybfC
b0704 JW0693
periplasmic protein (SEC through IM), YbfC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
MARB_ECOLI
P31121
marB
b1532 JW1525
periplasmic protein (SEC through IM), Multiple antibiotic resistance MarB
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
BAME_ECOLI
P0A937
bamE

smpA

b2617 JW2598
OM lipoprotein (SEC through IM, inserted in OM by LOL), assembly factor BamE
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
BAMA_ECOLI
P0A940
bamA

yaeT yzzN yzzY

b0177 JW0172
OM b-barrel protein (SEC through IM, inserted in OM by BAM), assembly factor BamA
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane
Outer Membrane ss-barrel protein(experimental)
 
 
SEC
 
BAM
yes
yes
YEAY_ECOLI
P0AA91
yeaY
b1806 JW1795
OM lipoprotein (SEC through IM, inserted in OM by LOL), YeaY
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YAFK_ECOLI
P0AA99
yafK
b0224 JW0214
periplasmic protein (SEC through IM), Putative L,D-transpeptidase YafK
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YDEI_ECOLI
P31130
ydeI
b1536 JW1529
periplasmic protein (SEC through IM), YdeI
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YIBG_ECOLI
P32106
yibG
b3596 JW3570
periplasmic protein (SEC through IM), YibG
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YIIQ_ECOLI
P32160
yiiQ
b3920 JW3891
periplasmic protein (SEC through IM), YiiQ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YIIX_ECOLI
P32167
yiiX
b3937 JW3908
periplasmic protein (SEC through IM), YiiX
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
ECPA_ECOLI
P0AAA3
ecpA

matB yagZ

b0293 JW0287
Fimbrial periplasmic protein (SEC through IM), Common pilus major fimbrillin subunit EcpA
Periplasmic
G
N/A
Fimbrium
Periplasmic (Experimental)
fimbriae
 
SEC
 
 
no
yes
YBIS_ECOLI
P0AAX8
ybiS
b0819 JW0803
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase YbiS
Peripheral outer membrane protein facing the periplasm
F3
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
YMBA_ECOLI
P0AB10
ymbA
b0952 JW5127
IM lipoprotein (SEC through IM), inserted in OM by LOL), Intertransport PqiC YmbA
Inner Membrane Lipoprotein
E
N/A
Cell outer membrane
Cytoplasmic
 
 
SEC
 
LOL
yes
yes
EFEO_ECOLI
P0AB24
efeO

ycdO

b1018 JW1003
periplasmic protein (SEC through IM), Iron uptake system component EfeO
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
YCEB_ECOLI
P0AB26
yceB
b1063 JW1050
OM lipoprotein (SEC through IM, inserted in OM by LOL), YceB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YIJF_ECOLI
P32668
yijF
b3944 JW3916
periplasmic protein (SEC through IM), YijF
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
First  Previous  1  2  3  4  5  6  7  8  9  10  11-20  Next  Last       Records 81 to 100 of 485     
Page Size 

 

 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.