STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PAL_ECOLI
P0A912
pal

excC

b0741 JW0731
Peptidoglycan-associated lipoprotein
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
OMPW_ECOLI
P0A915
ompW

yciD

b1256 JW1248
Outer membrane protein W
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
yes
YFIL_ECOLI
P11289
yfiL
b2602 JW5412
Uncharacterized protein yfiL (URF2)
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YJJA_ECOLI
P18390
yjjA
b4360 JW5795
Uncharacterized protein yjjA (Protein P-18)
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
OMPX_ECOLI
P0A917
ompX

ybiG

b0814 JW0799
Outer membrane protein X
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
SECB,TF
SEC
SURA,SKP
BAM
yes
yes
PA1_ECOLI
P0A921
pldA
b3821 JW3794
Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) (Detergent-resistant phospholipase A) (DR-phospholipase A) (Outer membrane phospholipase A) (OM PLA) (OMPLA) (Phosphatidylcholine 1-acylhydrolase)
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
SKP
BAM
yes
yes
TSX_ECOLI
P0A927
tsx

nupA

b0411 JW0401
Nucleoside-specific channel-forming protein tsx
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
no
YAAI_ECOLI
P28696
yaaI
b0013 JW0012
UPF0412 protein yaaI
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YBFC_ECOLI
P28915
ybfC
b0704 JW0693
Uncharacterized protein ybfC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YDCC_ECOLI
P28917
ydcC
b1460 JW1455
H repeat-associated protein ydcC (ORF-H)
Periplasmic
G
IM (predicted)
 
Cytoplasmic
 
 
SEC
 
 
no
no
WZA_ECOLI
P0A930
wza
b2062 JW2047
Putative polysaccharide export protein wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
N/A
Cell outer membrane | Multi-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
GFCE_ECOLI
P0A932
gfcE

yccZ

b0983 JW0966
Putative polysaccharide export protein gfcE (Group 4 capsule protein E homolog)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Multi-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
MLTA_ECOLI
P0A935
mltA

mlt ygdM

b2813 JW2784
Membrane-bound lytic murein transglycosylase A (EC 4.2.2.n1) (Mlt38) (Murein hydrolase A)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
BAME_ECOLI
P0A937
smpA

smpA

b2617 JW2598
Small protein A
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
MARB_ECOLI
P31121
marB
b1532 JW1525
Multiple antibiotic resistance protein marB
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YDEI_ECOLI
P31130
ydeI
b1536 JW1529
Uncharacterized protein ydeI
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YIBG_ECOLI
P32106
yibG
b3596 JW3570
Uncharacterized protein yibG (ORF-A3)
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
BAMA_ECOLI
P0A940
bamA

yaeT yzzN yzzY

b0177 JW0172
Outer membrane protein assembly factor yaeT (Omp85)
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane
Outer Membrane ss-barrel protein(experimental)
 
 
SEC
 
BAM
yes
yes
PANE_ECOLI
P0A9J4
panE

apbA

b0425 JW0415
2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR)
Outer Membrane Lipoprotein
I
IM (predicted)
Cytoplasm
Cytoplasmic (Experimental)
 
 
SEC
 
LOL
yes
yes
PTA_ECOLI
P0A9M8
pta
b2297 JW2294
Phosphate acetyltransferase (EC 2.3.1.8) (Phosphotransacetylase)
Periplasmic
G
IM (predicted-detected)
Cytoplasm
Cytoplasmic
 
SRP,TF
SEC
 
 
no
yes
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