STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RZOQ_ECOLI
C1P601
rzoQ
b4689 JW1545.1
Uncharacterized J domain-containing protein djlC
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
-
 
 
SEC
 
LOL
no
yes
YFJS_ECOLI
O52982
yfjS
b2636 JW5921
Uncharacterized lipoprotein yfjS
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
no
no
NLPA_ECOLI
P04846
nlpA
b3661 JW3635
Lipoprotein 28
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
YIDQ_ECOLI
P0ADM4
yidQ
b3688 JW5633
Uncharacterized protein yidQ
Inner Membrane Lipoprotein
E
N/A
 
Outer membrane Lipoprotein(experimental)
 
 
SEC
 
LOL
yes
yes
YMBA_ECOLI
P0AB10
ymbA
b0952 JW5127
Uncharacterized lipoprotein ymbA
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
Cytoplasmic
 
 
SEC
 
LOL
yes
yes
APBE_ECOLI
P0AB85
apbE

yojK yojL

b2214 JW5368
Thiamine biosynthesis lipoprotein ApbE
Inner Membrane Lipoprotein
E
IM (predicted)
Cell membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
YFIM_ECOLI
P46126
yfiM
b2586 JW2570
Uncharacterized protein yfiM
Inner Membrane Lipoprotein
E
N/A
 
Cytoplasmic
 
 
SEC
 
LOL
yes
yes
YIAF_ECOLI
P0ADK0
yiaF
b3554 JW5655
Uncharacterized protein yiaF
Inner Membrane Lipoprotein
E
Soluble IM Fraction
 
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
ACRA_ECOLI
P0AE06
acrA

lir mtcA

b0463 JW0452
Acriflavine resistance protein A
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
DCRB_ECOLI
P0AEE1
dcrB

yhhR

b3472 JW5682
Protein dcrB
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Periplasm
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
ACFD_ECOLI
P0CK95
yghJ
b4466 JW5925 ECK2968
Putative lipoprotein AcfD homolog
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
no
yes
YDJY_ECOLI
P76220
ydjY
b1751 JW5283
Uncharacterized protein ydjY
Inner Membrane Lipoprotein
E
Soluble IM Fraction
 
Inner membrane lipoprotein
 
 
SEC
 
LOL
no
yes
ACRE_ECOLI
P24180
acrE

envC

b3265 JW3233
Acriflavine resistance protein E (Protein envC)
Inner Membrane Lipoprotein
E
N/A
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
VISC_ECOLI
P25535
visC
b2906 JW2874
Protein visC (EC 1.-.-.-)
Inner Membrane Lipoprotein
E
IM (predicted-detected)
 
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
METQ_ECOLI
P28635
metQ

yaeC

b0197 JW0193
D-methionine-binding lipoprotein metQ
Inner Membrane Lipoprotein
E
Soluble IM Fraction
Cell membrane | Lipid-anchor
Inner membrane lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YIIG_ECOLI
P32151
yiiG
b3896 JW3867
Uncharacterized protein yiiG
Inner Membrane Lipoprotein
E
N/A
 
Inner membrane lipoprotein
 
 
SEC
 
LOL
no
yes
YJBH_ECOLI
P32689
yjbH
b4029 JW3989
Uncharacterized lipoprotein yjbH
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
YHJA_ECOLI
P37197
yhjA
b3518 JW3486
Probable cytochrome c peroxidase (EC 1.11.1.5)
Inner Membrane Lipoprotein
E
N/A
 
Membrane anchored
 
 
SEC
 
LOL
no
yes
YNFC_ECOLI
P67553
ynfC
b1585 JW5258
UPF0257 lipoprotein ynfC
Inner Membrane Lipoprotein
E
N/A
Cell membrane | Lipid-anchor
Inner membrane lipoprotein
 
 
SEC
 
LOL
yes
yes
YFBK_ECOLI
P76481
yfbK
b2270 JW2265
UDP-galactopyranose mutase (EC 5.4.99.9)
Inner Membrane Lipoprotein
E
N/A
 
Membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
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