STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DACC_ECOLI
P08506
dacC
b0839 JW0823
periplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine carboxypeptidase DacC
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell inner membrane
Membrane anchored (Experimental)
 
 
SEC
 
 
yes
yes
CPXP_ECOLI
P0AE85
cpxP

yiiO

b4484 JW5558
periplasmic peripheral IM protein (SEC through IM), CpxP
Peripheral inner membrane protein facing the periplasm
F2
N/A
Periplasm
Membrane associated (Experimental)
 
 
SEC
 
 
yes
yes
DACA_ECOLI
P0AEB2
dacA

pfv

b0632 JW0627
periplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine carboxypeptidase DacA
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Membrane anchored (Experimental)
 
 
SEC
 
 
yes
yes
MALE_ECOLI
P0AEX9
malE
b4034 JW3994
periplasmic & peripheral IM protein (SEC through IM), Maltose/maltodextrin-binding periplasmic MalE
Peripheral inner membrane protein facing the periplasm, periplasmic
F2, G
N/A
Periplasm
Periplasmic (Experimental)
 
SecB
SEC
SURA,SKP,YfgM
 
yes
yes
IAP_ECOLI
P10423
iap
b2753 JW2723
periplasmic peripheral IM protein (SEC through IM), Alkaline phosphatase isozyme conversion Iap
Peripheral inner membrane protein facing the periplasm
F2
N/A
 
Membrane associated (Experimental)
 
 
SEC
 
 
yes
yes
FECB_ECOLI
P15028
fecB
b4290 JW4250
periplasmic & peripheral IM protein (SEC through IM), Fe(3+) dicitrate-binding periplasmic FecB
Peripheral inner membrane protein facing the periplasm, periplasmic
F2, G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
PRC_ECOLI
P23865
prc

tsp

b1830 JW1819
periplasmic peripheral IM protein (SEC through IM), Tail-specific protease Prc
Peripheral inner membrane protein facing the periplasm
F2
N/A
Cell inner membrane; Peripheral membrane protein; Periplasmic side
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
DACB_ECOLI
P24228
dacB
b3182 JW3149
periplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine carboxypeptidase DacB
Peripheral inner membrane protein facing the periplasm
F2
N/A
Periplasm
Membrane anchored (Experimental)
 
 
SEC
 
 
yes
yes
YADE_ECOLI
P31666
yadE
b0130 JW0126
periplasmic peripheral IM protein (SEC through IM), YadE
Peripheral inner membrane protein facing the periplasm
F2
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
DACD_ECOLI
P33013
dacD

phsE yeeC

b2010 JW5329
periplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine carboxypeptidase DacD
Peripheral inner membrane protein facing the periplasm
F2
N/A
Cell inner membrane
Membrane anchored (Experimental)
 
 
SEC
 
 
yes
yes
CUSB_ECOLI
P77239
cusB

ylcD

b0574 JW0563
periplasmic peripheral IM protein (SEC through IM), Cation efflux system CusB
Peripheral inner membrane protein facing the periplasm
F2
N/A
 
Membrane anchored
 
 
SEC
 
 
yes
yes
YDGA_ECOLI
P77804
ydgA
b1614 JW1606
periplasmic peripheral IM protein (SEC through IM), YdgA
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell inner membrane
Cytoplasmic
 
 
SEC
 
 
yes
yes
Records 1 to 12 of 12     
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