STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Tat secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Tat secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
FHUD_ECOLI
P07822
fhuD
b0152 JW0148
periplasmic protein (TAT-SEC through IM), Iron(3+)-hydroxamate-binding FhuD
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
YNFG_ECOLI
P0AAJ1
ynfG
b1589 JW1581
periplasmic peripheral IM protein (TAT via piggyback through IM), Probable anaerobic dimethyl sulfoxide reductase chain YnfG
Peripheral inner membrane protein facing the periplasm
F2
N/A
 
Periplasmic
 
 
TAT (piggyback)
 
 
yes
yes
HYBA_ECOLI
P0AAJ8
hybA
b2996 JW2964
periplasmic peripheral IM protein (TAT-SEC through IM), Hydrogenase-2 operon HybA
Peripheral inner membrane protein facing the periplasm
F2
IM (predicted)
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
NRFC_ECOLI
P0AAK7
nrfC

yjcJ

b4072 JW4033
periplasmic protein (TAT through IM), NrfC
Periplasmic
G
N/A
 
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
NAPG_ECOLI
P0AAL3
napG

yojA yojB

b2205 JW2193
periplasmic protein (TAT through IM), Ferredoxin-type NapG
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
YCBK_ECOLI
P0AB06
ycbK
b0926 JW0909
periplasmic protein (TAT through IM), YcbK
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT
 
 
yes
yes
MBHM_ECOLI
P0ACE0
hybC
b2994 JW2962
periplasmic peripheral IM protein (TAT via piggyback through IM), Hydrogenase-2 large chain HybC
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell membrane; Peripheral membrane protein
Periplasmic (Experimental)
 
 
TAT (piggyback)
 
 
yes
yes
YFHG_ECOLI
P0AD44
yfhG
b2555 JW2539
OM lipoprotein (TAT-SEC through IM, inserted in OM by LOL), YfhG
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
TAT,SEC
 
LOL
yes
yes
DMSA_ECOLI
P18775
dmsA
b0894 JW5118
periplasmic peripheral IM protein (TAT-SEC through IM), Dimethyl sulfoxide reductase DmsA
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell membrane
Periplasmic (Experimental)
 
DmsD
TAT,SEC
 
 
yes
yes
DMSB_ECOLI
P18776
dmsB
b0895 JW0878
periplasmic peripheral IM protein (TAT via piggyback through IM), Anaerobic dimethyl sulfoxide reductase chain B DmsB
Peripheral inner membrane protein facing the periplasm
F2
N/A
 
Cytoplasmic
 
 
TAT (piggyback)
 
 
yes
yes
FDNG_ECOLI
P24183
fdnG
b1474 JW1470
periplasmic peripheral IM protein (TAT through IM), Formate dehydrogenase, nitrate-inducible, major subunit FdnG
Peripheral inner membrane protein facing the periplasm
F2
N/A
Periplasm
Membrane associated (Experimental)
 
 
TAT
 
 
no
yes
FTSP_ECOLI
P26648
ftsP

sufI

b3017 JW2985
periplasmic protein (TAT-SEC through IM), Cell division FtsP
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
no
yes
EFEB_ECOLI
P31545
efeB

ycdB

b1019 JW1004
periplasmic protein (TAT-SEC through IM), Deferrochelatase/peroxidase EfeB
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
TAT,SEC
 
 
yes
yes
FDOG_ECOLI
P32176
fdoG
b3894 JW3865
periplasmic protein (TAT through IM), Formate dehydrogenase-O major subunit FdoG
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
no
yes
TORA_ECOLI
P33225
torA
b0997 JW0982
periplasmic protein (TAT through IM), Trimethylamine-N-oxide reductase 1 TorA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
NAPA_ECOLI
P33937
napA

yojC yojD yojE

b2206 JW2194
periplasmic protein (TAT through IM), nitrate reductase NapA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
AMIA_ECOLI
P36548
amiA

yfeE

b2435 JW2428
periplasmic protein (TAT-SEC through IM), N-acetylmuramoyl-L-alanine amidase AmiA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
CUEO_ECOLI
P36649
cueO

yacK

b0123 JW0119
periplasmic protein (TAT-SEC through IM), Blue copper oxidase CueO
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
OPGD_ECOLI
P40120
mdoD

opgD ydcG yzzZ

b1424 JW1420
periplasmic protein (TAT-SEC through IM), Glucans biosynthesis D MdoD
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
no
yes
TORZ_ECOLI
P46923
torZ

bisZ

b1872 JW1861
periplasmic protein (TAT-SEC through IM), Trimethylamine-N-oxide reductase 2 TorZ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
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 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.