STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Tat secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

E.coli K-12 (MG1655) Tat secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
AMIC_ECOLI
P63883
amiC

ygdN

b2817 JW5449
N-acetylmuramoyl-L-alanine amidase AmiC (EC 3.5.1.28)
Periplasmic
G
N/A
Secreted
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
MBHT_ECOLI
P69741
hybO

yghV

b2997 JW2965
Hydrogenase-2 small chain (HYD2) (EC 1.12.99.6) (Membrane-bound hydrogenase 2 small subunit) (NiFe hydrogenase)
Peripheral inner membrane protein facing the periplasm
F2
IM (predicted)
Cell membrane | Peripheral membrane protein | Periplasmic sidePeriplasm
Membrane anchored (Experimental)
 
TF
TAT,SEC
 
 
yes
yes
WCAM_ECOLI
P71244
wcaM

yefK

b2043 JW2028
Colanic acid biosynthesis protein wcaM
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT
 
 
no
yes
YEDY_ECOLI
P76342
yedY
b1971 JW1954
Sulfoxide reductase catalytic subunit yedY (EC 1.8.-.-)
Peripheral inner membrane protein facing the periplasm
F2
N/A
Periplasm
Membrane anchored (Experimental)
 
 
TAT,SEC
 
 
no
yes
YAGT_ECOLI
P77165
yagT
b0286 JW0280
Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit
Periplasmic
G
N/A
 
Cytoplasmic
 
 
TAT
 
 
no
yes
YAGS_ECOLI
P77324
yagS
b0285 JW0279
Putative xanthine dehydrogenase yagS FAD-binding subunit (EC 1.17.1.4)
Periplasmic
G
N/A
 
Membrane anchored
 
 
TAT piggyback
 
 
no
yes
YNFE_ECOLI
P77374
ynfE
b1587 JW1579
Putative dimethyl sulfoxide reductase chain ynfE (DMSO reductase) (EC 1.8.99.-)
Peripheral inner membrane protein facing the periplasm
F2
N/A
Cell membrane | Peripheral membrane protein | Cytoplasmic side
Periplasmic
 
 
TAT
 
 
yes
yes
YDHX_ECOLI
P77375
ydhX
b1671 JW5271
Uncharacterized ferredoxin-like protein ydhX
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT,SEC
 
 
yes
yes
YAGR_ECOLI
P77489
yagR
b0284 JW0278
Putative xanthine dehydrogenase yagR molybdenum-binding subunit (EC 1.17.1.4)
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT piggyback
 
 
no
yes
YAHJ_ECOLI
P77554
yahJ
b0324 JW0316
Uncharacterized protein yahJ
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT,SEC
 
 
no
yes
YNFF_ECOLI
P77783
ynfF
b1588 JW5260
Probable dimethyl sulfoxide reductase chain ynfF (DMSO reductase) (EC 1.8.99.-)
Peripheral inner membrane protein facing the periplasm
F2
N/A
Cell membrane | Peripheral membrane protein | Cytoplasmic side
Periplasmic
 
 
TAT,SEC
 
 
yes
yes
First  Previous  1  2       Records 21 to 31 of 31     
Page Size 

 

 ©2015 e. Economou Lab