STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Tat secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Tat secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
FHUD_ECOLI
P07822
fhuD
b0152 JW0148
Iron(3+)-hydroxamate-binding protein fhuD (Ferric hydroxamate uptake protein D) (Ferrichrome-binding periplasmic protein) (Iron(III)-hydroxamate-binding protein fhuD)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
NRFC_ECOLI
P0AAK7
nrfC

yjcJ

b4072 JW4033
Protein nrfC
Periplasmic
G
N/A
 
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
NAPG_ECOLI
P0AAL3
napG

yojA yojB

b2205 JW2193
Ferredoxin-type protein napG
Periplasmic
G
N/A
 
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
YCBK_ECOLI
P0AB06
ycbK
b0926 JW0909
Uncharacterized protein ycbK
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT
 
 
yes
yes
FTSP_ECOLI
P26648
ftsP

sufI

b3017 JW2985
Protein sufI
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
no
yes
EFEB_ECOLI
P31545
efeB

ycdB

b1019 JW1004
Peroxidase ycdB (EC 1.11.1.-)
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
TAT,SEC
 
 
yes
yes
FDOG_ECOLI
P32176
fdoG
b3894 JW3865
Formate dehydrogenase-O major subunit (EC 1.2.1.2) (Aerobic formate dehydrogenase major subunit) (FDH-Z subunit alpha) (Formate dehydrogenase-O subunit alpha)
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
no
yes
TORA_ECOLI
P33225
torA
b0997 JW0982
Trimethylamine-N-oxide reductase 1 (TMAO reductase 1) (Trimethylamine oxidase 1) (EC 1.7.2.3)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
NAPA_ECOLI
P33937
napA

yojC yojD yojE

b2206 JW2194
Periplasmic nitrate reductase (EC 1.7.99.4)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
AMIA_ECOLI
P36548
amiA

yfeE

b2435 JW2428
Probable N-acetylmuramoyl-L-alanine amidase AmiA (EC 3.5.1.28)
Periplasmic
G
N/A
Secreted
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
CUEO_ECOLI
P36649
cueO

yacK

b0123 JW0119
Blue copper oxidase cueO (Copper efflux oxidase)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
OPGD_ECOLI
P40120
mdoD

opgD ydcG yzzZ

b1424 JW1420
Glucans biosynthesis protein D
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
no
yes
TORZ_ECOLI
P46923
torZ

bisZ

b1872 JW1861
Trimethylamine-N-oxide reductase 2 (TMAO reductase 2) (Trimethylamine oxidase 2) (EC 1.7.2.3)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
AMIC_ECOLI
P63883
amiC

ygdN

b2817 JW5449
N-acetylmuramoyl-L-alanine amidase AmiC (EC 3.5.1.28)
Periplasmic
G
N/A
Secreted
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
WCAM_ECOLI
P71244
wcaM

yefK

b2043 JW2028
Colanic acid biosynthesis protein wcaM
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT
 
 
no
yes
YAGT_ECOLI
P77165
yagT
b0286 JW0280
Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit
Periplasmic
G
N/A
 
Cytoplasmic
 
 
TAT
 
 
no
yes
YAGS_ECOLI
P77324
yagS
b0285 JW0279
Putative xanthine dehydrogenase yagS FAD-binding subunit (EC 1.17.1.4)
Periplasmic
G
N/A
 
Membrane anchored
 
 
TAT piggyback
 
 
no
yes
YDHX_ECOLI
P77375
ydhX
b1671 JW5271
Uncharacterized ferredoxin-like protein ydhX
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT,SEC
 
 
yes
yes
YAGR_ECOLI
P77489
yagR
b0284 JW0278
Putative xanthine dehydrogenase yagR molybdenum-binding subunit (EC 1.17.1.4)
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT piggyback
 
 
no
yes
YAHJ_ECOLI
P77554
yahJ
b0324 JW0316
Uncharacterized protein yahJ
Periplasmic
G
N/A
 
Periplasmic
 
 
TAT,SEC
 
 
no
yes
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