STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YMGJ_ECOLI
A5A612
ymgJ
b4594
Uncharacterized membrane protein ypdK
Periplasmic
G
IM (predicted)
 
-
 
 
SEC
 
 
no
yes
YJBT_ECOLI
A5A628
yjbT
b4620
Uncharacterized protein yjbT
Periplasmic
G
N/A
 
-
 
 
SEC
 
 
no
yes
SODM_ECOLI
P00448
sodA
b3908 JW3879
Superoxide dismutase [Mn] (EC 1.15.1.1) (MnSOD)
Periplasmic
G
N/A
 
Cytoplasmic
 
 
SEC, non classical
 
 
yes
yes
PPB_ECOLI
P00634
phoA
b0383 JW0374
Alkaline phosphatase (APase) (EC 3.1.3.1)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
no
yes
BTUE_ECOLI
P06610
btuE
b1710 JW1700
Vitamin B12 transport periplasmic protein BtuE (EC 1.-.-.-)
Periplasmic
G
N/A
Periplasm
Cytoplasmic
 
 
SEC, non classical
 
 
yes
yes
YGDB_ECOLI
P08370
ygdB
b2824 JW5450
Uncharacterized protein ygdB
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
ASPG2_ECOLI
P00805
ansB
b2957 JW2924
L-asparaginase 2 (EC 3.5.1.1) (L-asparaginase II) (L-ASNase II) (L-asparagine amidohydrolase II) (Colaspase)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
AMPC_ECOLI
P00811
ampC

ampA

b4150 JW4111
Beta-lactamase (EC 3.5.2.6) (Cephalosporinase)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
ARAF_ECOLI
P02924
araF
b1901 JW1889
L-arabinose-binding periplasmic protein (ABP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
RBSB_ECOLI
P02925
rbsB

prlB rbsP

b3751 JW3730
D-ribose-binding periplasmic protein
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
SKP
 
no
yes
YCCT_ECOLI
P0A8X4
yccT
b0964 JW0947
UPF0319 protein yccT
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YOBA_ECOLI
P0AA57
yobA
b1841 JW1830
Protein yobA
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
yes
yes
YACC_ECOLI
P0AA95
yacC
b0122 JW0118
Uncharacterized protein yacC
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
MATB_ECOLI
P0AAA3
matB

yagZ

b0293 JW0287
Fimbrillin matB homolog
Periplasmic
G
N/A
 
Periplasmic (Experimental)
fimbriae
 
SEC
 
 
no
yes
MALM_ECOLI
P03841
malM

molA

b4037 JW3997
Maltose operon periplasmic protein
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
LIVK_ECOLI
P04816
livK
b3458 JW3423
Leucine-specific-binding protein (L-BP) (LS-BP)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
ZRAP_ECOLI
P0AAA9
zraP

yjaI zra

b4002 JW5546
Zinc resistance-associated protein
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
YKGJ_ECOLI
P0AAL9
ykgJ
b0288 JW0282
Uncharacterized protein ykgJ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
PTRA_ECOLI
P05458
ptrA

ptr

b2821 JW2789
Protease 3 (EC 3.4.24.55) (Pitrilysin) (Protease III) (Protease pi)
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
SURA
 
yes
yes
YBAV_ECOLI
P0AAR8
ybaV
b0442 JW0432
Uncharacterized protein ybaV
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
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