E.coli EPEC (O127:H6) proteome

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Nucleoid Cytoplasmic Peripheral inner membrane protein facing the cytoplasm Integral inner membrane Ribosomal Inner membrane lipoprotein Peripheral inner membrane protein facing the periplasm Periplasmic Peripheral outer membrane protein facing the periplasm Outer membrane β-barrel protein Peripheral outer membrane protein facing the extra-cellular space Extra-cellular Outer membrane lipoprotein

Protein Information Subcellular Localization
Protein ID /
Accession #
(UniProt))
Gene Names
(UniProt)
Protein Name
(UniProt)
Full name
(STEPdb)
Symbol
(STEPdb)
Topology
Class
(UniProt)
Molecular weight (kDa) Protein
Length
Protein
Existence
(UniProt)
- -
DNAA_ECO27
B7UMG9
dnaA E2348C_4013 Chromosomal replication initiator protein DnaA Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 52.551 467 Inferred from homology
DPS_ECO27
B7UM08
dps E2348C_0764 DNA protection during starvation protein (EC 1.16.-.-) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm, nucleoid 18.695 167 Inferred from homology
FIS_ECO27
B7UJZ2
fis E2348C_3531 DNA-binding protein Fis Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 11.24 98 Inferred from homology
HDA_ECO27
B7UGN4
hda E2348C_2721 DnaA regulatory inactivator Hda Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 26.633 233 Inferred from homology
HFQ_ECO27
B7UQI1
hfq E2348C_4495 RNA-binding protein Hfq Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 11.166 102 Inferred from homology
IHFA_ECO27
B7US95
ihfA himA E2348C_1841 Integration host factor subunit alpha (IHF-alpha) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 11.354 99 Inferred from homology
IHFB_ECO27
B7UMZ8
ihfB himD E2348C_0905 Integration host factor subunit beta (IHF-beta) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 10.637 94 Inferred from homology
MALT_ECO27
B7UKC3
malT E2348C_3663 HTH-type transcriptional regulator MalT (ATP-dependent transcriptional activator MalT) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 103.062 901 Inferred from homology
MUKB_ECO27
B7UN10
mukB E2348C_0917 Chromosome partition protein MukB (Structural maintenance of chromosome-related protein) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm, Note=Restricted to the nucleoid region., nucleoid 170.224 1486 Inferred from homology
MUKF_ECO27
B7UN08
mukF E2348C_0915 Chromosome partition protein MukF Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm, Note=Restricted to the nucleoid region., nucleoid 50.619 440 Inferred from homology
RECF_ECO27
B7UMG7
recF E2348C_4011 DNA replication and repair protein RecF Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 40.514 357 Inferred from homology
RHLB_ECO27
B7UMN5
rhlB E2348C_4080 ATP-dependent RNA helicase RhlB (EC 3.6.4.13) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 47.126 421 Inferred from homology
RNB_ECO27
B7UR96
rnb E2348C_1480 Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 72.417 644 Inferred from homology
RNC_ECO27
B7UH07
rnc E2348C_2844 Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 25.55 226 Inferred from homology
RPOB_ECO27
B7UPE2
rpoB E2348C_4294 DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 150.632 1342 Inferred from homology
RPOZ_ECO27
B7UM71
rpoZ E2348C_3913 DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 10.237 91 Inferred from homology
RPPH_ECO27
B7UHP7
rppH nudH E2348C_3099 RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside polyphosphate hydrolase) Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 - 20.795 176 Inferred from homology
RRAA_ECO27
B7UNP9
rraA E2348C_4233 Regulator of ribonuclease activity A Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 17.36 161 Inferred from homology
B7UQR2_ECO27
B7UQR2
rraB E2348C_4579 Regulator of ribonuclease activity B Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm 15.603 138 Inferred from homology
B7UN09_ECO27
B7UN09
mukE E2348C_0916 Chromosome partition protein MukE Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm A,N,F1 Cytoplasm, Note=Restricted to the nucleoid region., nucleoid 26.947 234 Inferred from homology
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