E. coli K-12 / MG1655/ ATCC 47076 proteome

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Nucleoid Cytoplasmic Peripheral inner membrane protein facing the cytoplasm Integral inner membrane Ribosomal Inner membrane lipoprotein Peripheral inner membrane protein facing the periplasm Periplasmic Peripheral outer membrane protein facing the periplasm Outer membrane β-barrel protein Peripheral outer membrane protein facing the extra-cellular space Extra-cellular Outer membrane lipoprotein

Protein Information Subcellular Localization Targeting/Export System
Protein ID /
Accession #
(UniProt)
Gene Name
(UniProt)
Protein Name
(UniProt)
Order
Locus Name
Protein Name
(STEPdb)
Reference structure
Topology Class
Full name
(STEPdb)
Symbol
(STEPdb)
Topology Class
UniProt
Extracellular Appendage First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YKFM_ECOLI
A5A605
ykfM Uncharacterized protein YkfM b4586 integral IM protein (SEC in IM), YkfM ab initio Zhang model E14116 (score: 0.604) Integral Inner Membrane, cytoplasmic side B Membrane - SRP SEC - - no yes
YLCI_ECOLI
A5A607
ylcI Uncharacterized protein YlcI b4589 cytoplasmic protein, YlcI ab initio Zhang model E10780 (score: 0.575) Cytoplasmic A - - - - - - no yes
YMGI_ECOLI
A5A611
ymgI Uncharacterized protein YmgI b4593 cytoplasmic protein, YmgI ab initio Zhang model E10796 (score: 0.467) Cytoplasmic A - - - - - - no yes
YMGJ_ECOLI
A5A612
ymgJ Uncharacterized protein YmgJ b4594 periplasmic protein (SEC through IM), YmgJ ab initio Zhang model E10797 (score: 0.515) Periplasmic G - - - SEC - - no yes
YCIY_ECOLI
A5A613
yciY Uncharacterized protein YciY b4595 cytoplasmic protein, YciY ab initio Zhang model E10528 (score: 0.66) Cytoplasmic A - - - - - - no yes
YCIZ_ECOLI
A5A614
yciZ UPF0509 protein YciZ b4596 JW1277 cytoplasmic protein, UPF0509 YciZ ab initio Zhang model E10529 (score: 0.672) Cytoplasmic A - - - - - - no yes
YNCL_ECOLI
A5A615
yncL Uncharacterized protein YncL b4598 JW1439.1 integral IM protein (SEC in IM), YncL TBM Zhang model E10808 (score: 0.575) Integral Inner Membrane, cytoplasmic side B Cell inner membrane - SRP SEC - - no yes
YNEM_ECOLI
A5A616
yneM Small protein MgtS b4599 JW1527.1 integral IM protein (SEC in IM), Small MgtS 5oqt PDB ID, chain C, for protein A5A616 Integral Inner Membrane, cytoplasmic side B Cell inner membrane - SRP SEC - - no yes
YDGU_ECOLI
A5A617
ydgU Uncharacterized protein YdgU b4601 JW1589 integral IM protein (SEC in IM), YdgU TBM Zhang model E10563 (score: 0.519) Integral Inner Membrane, cytoplasmic side B - - SRP SEC - - no yes
YNHF_ECOLI
A5A618
ynhF Uncharacterized protein YnhF b4602 JW1649.1 integral IM protein (SEC in IM), YnhF TBM Zhang model E10817 (score: 0.633) Integral Inner Membrane, cytoplasmic side B Cell inner membrane - SRP SEC - - no yes
YOJO_ECOLI
A5A619
yojO Uncharacterized protein YojO b4604 cytoplasmic protein, YojO ab initio Zhang model E10835 (score: 0.625) Cytoplasmic A - - - - - - no yes
YPFM_ECOLI
A5A621
ypfM Uncharacterized protein YpfM b4606 JW2454.1 cytoplasmic protein, YpfM TBM Zhang model E14200 (score: 0.571) Cytoplasmic A Cytoplasm - - - - - no yes
DINQ_ECOLI
A5A624
dinQ Uncharacterized protein DinQ b4613 integral IM protein (SEC in IM), DinQ TBM Zhang model E10066 (score: 0.672) Integral Inner Membrane, cytoplasmic side B Cell inner membrane - SRP SEC - - no yes
YIBV_ECOLI
A5A625
yibV Protein YibV b4615 cytoplasmic protein, YibV ab initio Zhang model E10712 (score: 0.535) Cytoplasmic A - - - - - - no no
TISB_ECOLI
A5A627
tisB Small toxic protein TisB (LexA-regulated protein TisB) b4618 JW3649 integral IM protein (SEC in IM), Small toxin TisB TBM Zhang model E10402 (score: 0.629) Integral Inner Membrane, cytoplasmic side B Cell inner membrane - SRP SEC - - no no
YJBT_ECOLI
A5A628
yjbT Uncharacterized protein YjbT b4620 periplasmic protein (SEC through IM), YjbT ab initio Zhang model E10740 (score: 0.458) Periplasmic G - - - SEC - - no yes
YTCA_ECOLI
A5A630
ytcA Uncharacterized protein YtcA b4622 integral IM protein (SEC in IM), YtcA TBM Zhang model E10873 (score: 0.378) Integral Inner Membrane, cytoplasmic side B Cell membrane - - SEC - - no yes
LPFUR_ECOLI
A8DYP9
uof fur leader peptide b4637 cytoplasmic protein, fur leader peptide Uof TBM Zhang model E10418 (score: 0.514) Cytoplasmic A - - - - - - no yes
YTHA_ECOLI
A8DYQ1
ythA Uncharacterized protein YthA b4655 JW5769.1 integral IM protein (SEC in IM), YthA TBM Zhang model E10878 (score: 0.62) Integral Inner Membrane, cytoplasmic side B Cell inner membrane - - SEC - - no yes
SGRT_ECOLI
C1P5Z7
sgrT Putative inhibitor of glucose uptake transporter SgrT b4662 JW0068.1 cytoplasmic peripheral IM protein, Putative inhibitor of glucose uptake transporter SgrT no structure available Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm A,F1 - - - - - - no yes
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