E.coli K-12 (MG1655) Non-classical Secretome

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Nucleoid Cytoplasmic Peripheral inner membrane protein facing the cytoplasm Integral inner membrane Ribosomal Inner membrane lipoprotein Peripheral inner membrane protein facing the periplasm Periplasmic Peripheral outer membrane protein facing the periplasm Outer membrane β-barrel protein Peripheral outer membrane protein facing the extra-cellular space Extra-cellular Outer membrane lipoprotein

Protein Information Subcellular Localization Targeting/Export System
Protein ID /
Accession #
(UniProt)		 Gene Name
(UniProt)		 Protein Name
(UniProt)		 Order
Locus Name		 Protein Name
(STEPdb)		 Reference structure
Topology Class
Full name
(STEPdb)		 Symbol
(STEPdb)		 Topology Class
UniProt		 Extracellular Appendage First Level
Targeting
Chaperoning		 First Level
Secretion
System		 Second Level
Targeting
Chaperoning		 Second Level
Secretion
System		 K-12 Core
Proteome
(yes/no)		 K-12 Basic
Proteome
(yes/no)
SODM_ECOLI
P00448		 sodA Superoxide dismutase [Mn] (EC 1.15.1.1) (MnSOD) b3908 JW3879 periplasmic protein (SEC through IM), Superoxide dismutase SodA 1ix9 PDB ID, chain A, for protein P00448 Periplasmic G - - - SEC, non classical - - yes yes
YGFZ_ECOLI
P0ADE8		 ygfZ tRNA-modifying protein YgfZ b2898 JW2866 cytoplasmic & periplasmic protein (SEC through IM), tRNA-modifying YgfZ 1nrk PDB ID, chain A, for protein P0ADE8 Cytoplasmic, Periplasmic A,G Cytoplasm - - SEC, non classical - - yes yes
FTSL_ECOLI
P0AEN4		 ftsL Cell division protein FtsL b0083 JW0081 IM lipoprotein (SEC through IM), Cell division FtsL ab initio Zhang model E10115 (score: 0.674) Inner Membrane Lipoprotein E Cell inner membrane - - SEC, non classical - - yes yes
SODF_ECOLI
P0AGD3		 sodB Superoxide dismutase [Fe] (EC 1.15.1.1) b1656 JW1648 periplasmic protein (SEC through IM), Superoxide dismutase SodB 2nyb PDB ID, chain A, for protein P0AGD3 Periplasmic G - - - SEC, non classical - - yes yes
PNCB_ECOLI
P18133		 pncB Nicotinate phosphoribosyltransferase (NAPRTase) (EC 6.3.4.21) b0931 JW0914 periplasmic protein (SEC through IM), Nicotinate phosphoribosyltransferase PncB TBM Zhang model E12517 (score: 0.943) Periplasmic G - - - SEC, non classical - - no yes
SPEA_ECOLI
P21170		 speA Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19) b2938 JW2905 periplasmic protein (SEC through IM), Biosynthetic arginine decarboxylase SpeA 3nzq PDB ID, chain A, for protein P21170 Periplasmic G Periplasm - TF SEC, non classical - - yes yes
EAEH_ECOLI
P36943		 eaeH Putative attaching and effacing protein homolog b0297 JW0291 periplasmic protein (SEC through IM), Putative attaching and effacing homolog EaeH TBM Zhang model E11369 (score: 0.386) Periplasmic G - - - SEC, non classical - - no no
YCGI_ECOLI
P76000		 ycgI Putative uncharacterized protein YcgI b4521 JW1162/JW5179 b1173 OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative YcgI TBM Zhang model E10511 (score: 0.532) Outer Membrane b-barrel protein H - - - SEC, non classical - Autotransporter(T5S) no no
YCGV_ECOLI
P76017		 ycgV Uncharacterized protein YcgV b1202 JW1193 OM b-barrel protein (SEC through IM, T5S secreted through OM), YcgV TBM Zhang model E13435 (score: 0.507) Outer Membrane b-barrel protein H - - SRP SEC, non classical - Autotransporter(T5S) no yes
MDTA_ECOLI
P76397		 mdtA Multidrug resistance protein MdtA (Multidrug transporter MdtA) b2074 JW5338 periplasmic peripheral IM protein (SEC through IM), Multidrug resistance MdtA TBM Zhang model E12128 (score: 0.422) Peripheral inner membrane protein facing the periplasm F2 Cell inner membrane - - SEC, non classical - - yes yes
YDEU_ECOLI
P77286		 ydeU Uncharacterized protein YdeU b1509 JW1502 OM b-barrel protein (SEC through IM, T5S secreted through OM), YdeU TBM Zhang model E13511 (score: 0.666) Outer Membrane b-barrel protein H - - - SEC, non classical - Autotransporter(T5S) no yes
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