Chaperonome of E.coli K-12: Cross-comparisson plots
Prediction tools used:
- Dynamine (Backbone dynamics)
- EFoldMine (Early folding and foldon regions)
- IUPred2A (Disorder and Intrinsically Disordered Regions)
- Hydrophobicity plot (Kyte&Doolittle scale)
See “References” below for more information.”
References:
- Dynamine Website, Role: Backbone dynamics of amino acids. Ref: PMID:24225580
- EFoldMine Website, Role: Early folding prediction and foldons. Ref: PMID:28821744
- IUPred2A Website, Role: Prediction of disorder and Intrinsically Unstructured/Disordered Regionsin in proteins - tool. Ref: PMID:29860432
- Hydrophobicity plot Website, Role: Hydrophobicity of amino acids as described by Kyte&Doolit. Ref: PMID:7108955
Cytoplasmic:
Ribosomal:
IMP:
Secreted:
OMP:
An example of the protein cross-comparison plots for the Integral Inner Membrane protein SecY (P0AGA2):
